C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: retinitis pigmentosa GTPase regulator
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000470183 RPGR-005 ENSG00000156313 9606 - X:38317246-38318990 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainColonKidneyENST00000470183
Transcript ID Bladder Brain Colon Kidney
ENST00000470183 2.128±0.00 6.452±0.00 11.285±0.00 2.310±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005YZ CIL_0005YZ_0001 CGP X:38149336-38327564
CIL_0005YY CIL_0005YY_0001 CGP X:38269163-38421450

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000124744 Rpgr-008 retained_intron Mus_musculus 0 291
ENSMUST00000155734 Rpgr-007 retained_intron Mus_musculus 0 279
ENSMUST00000115532 Rpgr-002 protein_coding Mus_musculus 0 279
ENSMUST00000115533 Rpgr-005 protein_coding Mus_musculus 0 279
ENSMUST00000073392 Rpgr-003 protein_coding Mus_musculus 0 279
ENSMUST00000044598 Rpgr-001 protein_coding Mus_musculus 0 279
ENSMUST00000115534 Rpgr-004 protein_coding Mus_musculus 0 279
ENSMUST00000072393 Rpgr-006 protein_coding Mus_musculus 0 279

Loading