| Transcript ID | Brain | Ovary | Placenta |
|---|---|---|---|
| ENSMUST00000072393 | 6.156±0.00 | 5.588±3.92 | 5.600±1.31 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | retinitis pigmentosa GTPase regulator | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000072393  |
Rpgr-006 |
ENSMUSG00000031174 |
10090 | - |
X:10073621-10216920  |
protein_coding |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0005Z7 | CIL_0005Z7_0002 | CGP | X:9885622-10117709 |
| CIL_0005YZ | CIL_0005YZ_0002 | CGP | X:10037977-10216920 |
| CIL_0005YY | CIL_0005YY_0002 | CGP | X:10073621-10321024 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005515 | IPI | protein binding |
| GO:0005737 | IDA | cytoplasm |
| GO:0005929 | IDA | cilium |
| GO:0007601 | IMP | visual perception |
| GO:0042462 | IMP | eye photoreceptor cell development |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000318842
|
RPGR-001 | protein_coding | Homo_sapiens | 0 | 1042 |
|
ENST00000339363
|
RPGR-201 | protein_coding | Homo_sapiens | 0 | 1042 |
|
ENST00000378505
|
RPGR-009 | protein_coding | Homo_sapiens | 0 | 1042 |
|
ENST00000470183
|
RPGR-005 | retained_intron | Homo_sapiens | 0 | 279 |
|
ENST00000474584
|
RPGR-007 | nonsense_mediated_decay | Homo_sapiens | 0 | 1024 |
|
ENST00000482855
|
RPGR-002 | nonsense_mediated_decay | Homo_sapiens | 0 | 1042 |
