C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: vacuolar protein sorting 72 homolog (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000471423 VPS72-005 ENSG00000163159 9606 - 1:151185522-151190143 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderENST00000471423
Transcript ID Bladder
ENST00000471423 3.616±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000UG CIL_0000UG_0002 CGP 1:151156664-151170297

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000009102 Vps72-001 protein_coding Mus_musculus 0 405
ENSMUST00000173594 Gm18737-001 processed_pseudogene Mus_musculus 0 302
ENSMUST00000139296 Vps72-002 processed_transcript Mus_musculus 0 219
ENSMUST00000136076 Vps72-003 processed_transcript Mus_musculus 0 219
ENSMUST00000152333 Vps72-005 retained_intron Mus_musculus 0 217
ENSMUST00000125548 Vps72-004 processed_transcript Mus_musculus 0 215

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