C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: vacuolar protein sorting 72 (yeast)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000009102 Vps72-001 ENSMUSG00000008958 10090 + 3:95111022-95123051 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000009102
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000009102 16.087±8.08 28.037±1.56 20.457±1.91 41.895±8.79 22.497±6.13 30.576±6.94 10.747±2.51 16.566±1.68 12.468±2.69 25.534±0.52 24.217±2.56 34.728±12.98 39.274±18.76 13.624±1.37

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00064I CIL_00064I_0002 CGP 3:95111022-95129209

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0016568 IEA chromatin modification
GO:0035019 IDA somatic stem cell maintenance
GO:0043234 ISS protein complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000354473 VPS72-002 protein_coding Homo_sapiens 0 1142
ENST00000368892 VPS72-001 protein_coding Homo_sapiens 0 1249
ENST00000463470 VPS72-004 processed_transcript Homo_sapiens 0 278
ENST00000471423 VPS72-005 retained_intron Homo_sapiens 0 405
ENST00000491094 VPS72-003 retained_intron Homo_sapiens 0 1249
ENST00000496809 VPS72-007 processed_transcript Homo_sapiens 0 950

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