C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: vacuolar protein sorting 72 (yeast)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000125548 Vps72-004 ENSMUSG00000008958 10090 + 3:95111073-95122721 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000125548
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000125548 8.647±3.05 11.999±1.42 14.737±2.01 22.504±3.91 9.986±2.28 13.946±1.18 3.875±0.06 6.554±1.52 7.837±3.01 9.546±2.37 22.041±9.27 19.141±8.30 3.059±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00064I CIL_00064I_0002 CGP 3:95111022-95129209

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000354473 VPS72-002 protein_coding Homo_sapiens 0 872
ENST00000368892 VPS72-001 protein_coding Homo_sapiens 0 976
ENST00000463470 VPS72-004 processed_transcript Homo_sapiens 0 278
ENST00000471423 VPS72-005 retained_intron Homo_sapiens 0 215
ENST00000491094 VPS72-003 retained_intron Homo_sapiens 0 976
ENST00000496809 VPS72-007 processed_transcript Homo_sapiens 0 972

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