C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | leucine proline-enriched proteoglycan (leprecan) 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000472802  |
LEPRE1-006 |
ENSG00000117385 |
9606 | - |
1:42746531-42747576  |
retained_intron |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008PM | CIL_0008PM_0001 | VISTA | 1:42456139-43057783 |
| CIL_0005B1 | CIL_0005B1_0002 | CGP | 1:42733093-42767084 |
| CIL_0005B2 | CIL_0005B2_0002 | CGP | 1:42746335-42794493 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000081606
|
Lepre1-007 | protein_coding | Mus_musculus | 0 | 327 |
|
ENSMUST00000136278
|
Lepre1-004 | nonsense_mediated_decay | Mus_musculus | 0 | 327 |
|
ENSMUST00000030393
|
Lepre1-012 | protein_coding | Mus_musculus | 0 | 327 |
|
ENSMUST00000121111
|
Lepre1-001 | protein_coding | Mus_musculus | 0 | 327 |
|
ENSMUST00000127087
|
Lepre1-009 | retained_intron | Mus_musculus | 0 | 300 |
|
ENSMUST00000102662
|
Lepre1-003 | protein_coding | Mus_musculus | 0 | 261 |
|
ENSMUST00000153940
|
Lepre1-002 | processed_transcript | Mus_musculus | 0 | 261 |
|
ENSMUST00000142361
|
Lepre1-010 | processed_transcript | Mus_musculus | 5.99756e-43 | 178 |
