C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005B2_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000071212-ENSDARG00000071211 CGP 7955 11:40309260-40345902
GeneTranscriptPositionBiotype
ENSDARG00000071211 (C11H1orf50)
chromosome 1 open reading frame 50 		ENSDART00000105140 (C11H1orf50-201) 40340778-40345898 protein_coding
ENSDART00000157285 (C11H1orf50-001) 40338666-40345902 protein_coding
ENSDARG00000071212 (lepre1)
leucine proline-enriched proteoglycan (leprecan) 1 		ENSDART00000102827 (lepre1-001) 40309260-40338900 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0005B2_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000117385-ENSG00000164008 CGP 9606 1:42746335-42794493
GeneTranscriptPositionBiotype
ENSG00000117385 (LEPRE1)
leucine proline-enriched proteoglycan (leprecan) 1 		ENST00000236040 (LEPRE1-002) 42746375-42767012 protein_coding
ENST00000296388 (LEPRE1-001) 42746375-42767023 protein_coding
ENST00000372526 (LEPRE1-012) 42759257-42767002 protein_coding
ENST00000397054 (LEPRE1-201) 42746335-42767084 protein_coding
ENST00000431412 (LEPRE1-008) 42747723-42755209 nonsense_mediated_decay
ENST00000447502 (LEPRE1-011) 42751725-42754987 protein_coding
ENST00000460031 (LEPRE1-009) 42746374-42766989 retained_intron
ENST00000460831 (LEPRE1-005) 42747758-42748743 retained_intron
ENST00000462474 (LEPRE1-007) 42746508-42747798 processed_transcript
ENST00000463465 (LEPRE1-010) 42754980-42762403 retained_intron
ENST00000472802 (LEPRE1-006) 42746531-42747576 retained_intron
ENST00000481465 (LEPRE1-013) 42749901-42754936 retained_intron
ENST00000492956 (LEPRE1-003) 42759986-42767017 retained_intron
ENST00000495874 (LEPRE1-004) 42746375-42767022 retained_intron
ENSG00000164008 (C1orf50)
chromosome 1 open reading frame 50 		ENST00000372525 (C1orf50-001) 42767269-42775747 protein_coding
ENST00000464081 (C1orf50-004) 42767292-42794493 nonsense_mediated_decay
ENST00000468913 (C1orf50-007) 42769678-42775428 processed_transcript
ENST00000494155 (C1orf50-003) 42773187-42774770 retained_intron
ENST00000603943 (C1orf50-008) 42767306-42789937 nonsense_mediated_decay
ENSG00000228452 (RP5-994D16.9)
 ENST00000447572 (RP5-994D16.9-001) 42775813-42776790 antisense

Homo sapiens Ensembl (GRCh38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005B2_0001ENSDARG00000071211ENSDART00000105140ENSDART00000157285ENSDARG00000071212ENSDART00000102827CIL_0005B2_0002ENSG00000117385ENST00000236040ENST00000296388ENST00000372526ENST00000397054ENST00000431412ENST00000447502ENST00000460031ENST00000460831ENST00000462474ENST00000463465ENST00000472802ENST00000481465ENST00000492956ENST00000495874ENSG00000164008ENST00000372525ENST00000464081ENST00000468913ENST00000494155ENST00000603943ENSG00000228452ENST00000447572
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005B2_0001ENSDARG00000071211ENSDART00000105140ENSDART00000157285ENSDARG00000071212ENSDART00000102827CIL_0005B2_0002ENSG00000117385ENST00000236040ENST00000296388ENST00000372526ENST00000431412ENST00000447502ENST00000460031ENST00000462474ENST00000463465ENST00000481465ENST00000492956ENST00000495874ENSG00000164008ENST00000372525ENST00000468913ENST00000494155ENST00000603943ENSG00000228452ENST00000447572
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000071211 ENSDART00000105140 N/A N/A N/A 10.262±0.71 N/A N/A 5.557±2.47 26.437±0.00 3.066±0.00 N/A 10.485±0.00 N/A N/A N/A
ENSDART00000157285 N/A N/A N/A 1.247±0.26 N/A N/A 1.455±0.69 N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000071212 ENSDART00000102827 N/A N/A N/A 1.030±0.26 N/A N/A 2.520±0.16 1.699±0.66 0.255±0.00 N/A 1.412±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000117385 ENST00000236040 N/A N/A N/A 1.300±0.00 N/A N/A 0.463±0.00 N/A N/A 4.562±0.00 N/A 3.021±1.01 N/A 3.316±0.00
ENST00000296388 11.937±0.00 N/A 0.669±0.00 N/A 3.850±3.31 2.737±0.00 1.723±0.00 3.396±2.05 6.480±0.00 N/A N/A 7.943±4.65 54.613±8.74 11.110±0.69
ENST00000372526 N/A N/A N/A N/A 5.169±0.00 2.148±0.00 N/A 4.321±0.00 N/A N/A 1.387±0.00 N/A N/A N/A
ENST00000397054 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000431412 N/A N/A N/A N/A N/A N/A 1.771±0.00 7.172±0.00 5.936±0.00 N/A N/A N/A N/A N/A
ENST00000447502 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 45.598±0.00 N/A
ENST00000460031 N/A 5.746±0.00 N/A N/A 2.300±0.00 0.932±0.52 N/A 2.022±0.00 0.890±0.00 4.594±0.00 1.519±0.00 2.767±2.00 N/A 5.270±0.00
ENST00000460831 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000462474 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.590±0.00 N/A 9.543±0.00 N/A 19.779±0.00
ENST00000463465 N/A N/A N/A 0.492±0.00 N/A N/A N/A N/A 1.348±0.00 N/A N/A N/A N/A N/A
ENST00000472802 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000481465 N/A N/A 0.968±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000492956 N/A N/A N/A 0.460±0.00 N/A N/A N/A N/A N/A N/A 0.190±0.00 N/A N/A N/A
ENST00000495874 N/A N/A N/A 0.791±0.65 0.593±0.00 N/A 0.386±0.19 N/A N/A N/A N/A N/A N/A N/A
ENSG00000164008 ENST00000372525 4.217±0.00 4.340±0.00 0.341±0.00 2.693±1.32 2.221±0.71 3.268±2.28 2.350±1.49 2.816±1.77 2.862±1.59 1.275±0.97 4.334±1.19 3.188±2.73 4.149±1.77 7.671±3.53
ENST00000464081 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000468913 N/A N/A N/A N/A N/A N/A 1.048±0.00 N/A N/A 0.914±0.00 N/A 0.421±0.00 N/A N/A
ENST00000494155 N/A N/A 0.207±0.00 N/A N/A 0.404±0.00 N/A N/A N/A N/A N/A 0.425±0.00 N/A 0.837±0.00
ENST00000603943 N/A N/A 0.060±0.00 N/A 1.711±0.00 N/A N/A 1.010±0.00 N/A 0.698±0.00 N/A 0.855±0.00 N/A 2.760±0.00
ENSG00000228452 ENST00000447572 0.311±0.00 N/A 0.333±0.00 N/A 0.493±0.00 0.539±0.00 0.241±0.00 0.437±0.00 0.747±0.00 0.550±0.00 1.808±0.64 0.719±0.00 0.290±0.00 3.767±2.09

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