C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: drebrin 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000472831 DBN1-003 ENSG00000113758 9606 - 5:177456934-177473624 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000472831
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000472831 19.605±0.00 10.248±0.00 19.734±0.00 10.798±0.00 4.437±0.00 17.951±0.00 0.700±0.00 11.077±0.00 2.044±0.00 26.755±7.03 3.461±1.43 23.831±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008A2 CIL_0008A2_0001 VISTA 5:177089375-177692188
CIL_0000XB CIL_0000XB_0002 CGP 5:177446445-177474401
CIL_0002YE CIL_0002YE_0001 CGP 5:177456608-177497606

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000109923 Dbn1-002 protein_coding Mus_musculus 0 2093
ENSMUST00000109921 Dbn1-009 protein_coding Mus_musculus 0 1823
ENSMUST00000021950 Dbn1-001 protein_coding Mus_musculus 0 1375
ENSMUST00000135705 Dbn1-003 retained_intron Mus_musculus 0 723
ENSMUST00000139275 Dbn1-005 protein_coding Mus_musculus 0 435
ENSMUST00000139516 Dbn1-008 retained_intron Mus_musculus 0 364
ENSMUST00000127867 Dbn1-007 retained_intron Mus_musculus 0 316
ENSMUST00000124480 Dbn1-006 processed_transcript Mus_musculus 0 316
ENSMUST00000175813 Dbn1-010 retained_intron Mus_musculus 0 237

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