C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: actinin, alpha 4 pseudogene 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000473049 ACTN4P2-001 ENSG00000214141 9606 + 1:37776670-37779418 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalKidneyTestisENST00000473049
Transcript ID Adrenal Kidney Testis
ENST00000473049 0.010±0.00 0.010±0.00 0.069±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00095Y CIL_00095Y_0001 VISTA 1:37729017-38330016

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000021554 Actn1-201 protein_coding Mus_musculus 2e-38 165
ENSMUST00000167327 Actn1-202 protein_coding Mus_musculus 2e-37 161
ENSDART00000100217 actn1-201 protein_coding Danio_rerio 0.0000000000006 81
ENSDART00000133740 actn1-002 nonsense_mediated_decay Danio_rerio 0.0000000000006 81
ENSDART00000140243 actn1-001 protein_coding Danio_rerio 0.0000000000006 81
ENSDART00000123678 actn1-202 protein_coding Danio_rerio 0.000000001 69

Loading