C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATPase, Na+/K+ transporting, alpha 3 polypeptide
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000473086 ATP1A3-011 ENSG00000105409 9606 - 19:41985067-41997497 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverOvaryENST00000473086
Transcript ID Liver Ovary
ENST00000473086 0.105±0.00 0.126±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00030U CIL_00030U_0001 CGP 19:41956681-41997497
CIL_0003YN CIL_0003YN_0001 CGP 19:41966582-42069498

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0016021 IEA integral component of membrane
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000146595 Atp1a3-003 retained_intron Mus_musculus 0 1131
ENSMUST00000080882 Atp1a3-001 protein_coding Mus_musculus 0 1131
ENSMUST00000102858 Atp1a3-002 protein_coding Mus_musculus 0 1131
ENSMUST00000154077 Atp1a3-004 processed_transcript Mus_musculus 0 811
ENSDART00000124130 atp1a3b-201 protein_coding Danio_rerio 0 616
ENSDART00000149975 atp1a3b-001 protein_coding Danio_rerio 0 616
ENSMUST00000125444 Atp1a3-005 retained_intron Mus_musculus 0 457
ENSMUST00000111243 Atp1a4-001 protein_coding Mus_musculus 0 335

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