C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: solute carrier family 6 (proline IMINO transporter), member 20
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000473146 SLC6A20-004 ENSG00000163817 9606 - 3:45758504-45772339 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastLungENST00000473146
Transcript ID Bladder Brain Breast Lung
ENST00000473146 0.484±0.00 0.316±0.00 0.089±0.00 0.030±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00073G CIL_00073G_0001 CGP 3:45689056-45796535

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000040960 Slc6a20a-001 protein_coding Mus_musculus 0 1267
ENSMUST00000171647 Slc6a20a-002 protein_coding Mus_musculus 0 1264
ENSMUST00000168824 Slc6a20b-003 nonsense_mediated_decay Mus_musculus 0 1122
ENSMUST00000171122 Slc6a20b-004 processed_transcript Mus_musculus 0 1122
ENSMUST00000026273 Slc6a20b-001 protein_coding Mus_musculus 0 1122
ENSMUST00000166800 Slc6a20b-002 retained_intron Mus_musculus 0 699
ENSMUST00000170591 Slc6a20a-003 protein_coding Mus_musculus 0 268

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