C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SOGA family member 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000473298 SOGA3-002 ENSG00000255330 9606 - 6:127444039-127476064 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainColonKidneyLungOvaryPlacentaTestisENST00000473298
Transcript ID Adipose Adrenal Brain Colon Kidney Lung Ovary Placenta Testis
ENST00000473298 0.985±0.00 0.207±0.00 7.831±3.56 2.117±0.00 0.197±0.10 0.931±0.00 0.250±0.13 0.101±0.03 4.202±1.46

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001EL CIL_0001EL_0002 CGP 6:127438406-127519355

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005615 IEA extracellular space
GO:0010506 IEA regulation of autophagy

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000092629 Soga3-201 protein_coding Mus_musculus 0 1262
ENSMUST00000092627 9330159F19Rik-201 protein_coding Mus_musculus 0 880

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