C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: dyskeratosis congenita 1, dyskerin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000473552 DKC1-009 ENSG00000130826 9606 + X:154762913-154766555 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderENST00000473552
Transcript ID Bladder
ENST00000473552 1.829±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003LH CIL_0003LH_0001 CGP X:154675249-154777689
CIL_0003LI CIL_0003LI_0001 CGP X:154762742-154821007

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000131155 Dkc1-011 protein_coding Mus_musculus 0 621
ENSMUST00000033776 Dkc1-001 protein_coding Mus_musculus 0 621
ENSMUST00000140609 Dkc1-006 nonsense_mediated_decay Mus_musculus 0 592
ENSMUST00000131867 Dkc1-004 processed_transcript Mus_musculus 0 571
ENSMUST00000132000 Dkc1-002 protein_coding Mus_musculus 0 418
ENSMUST00000145222 Dkc1-005 retained_intron Mus_musculus 0 411
ENSMUST00000135389 Dkc1-003 retained_intron Mus_musculus 0 366
ENSMUST00000117596 Gm14035-001 processed_pseudogene Mus_musculus 0 315
ENSMUST00000122236 Gm13776-001 processed_pseudogene Mus_musculus 4.2039e-45 185

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