C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003LH_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000160219-ENSG00000130826 CGP 9606 X:154675249-154777689
GeneTranscriptPositionBiotype
ENSG00000130826 (DKC1)
dyskeratosis congenita 1, dyskerin 		ENST00000369550 (DKC1-001) 154762756-154777689 protein_coding
ENST00000412124 (DKC1-011) 154767016-154776260 nonsense_mediated_decay
ENST00000413910 (DKC1-008) 154762891-154769291 protein_coding
ENST00000426673 (DKC1-005) 154768302-154776272 nonsense_mediated_decay
ENST00000437719 (DKC1-010) 154764927-154768358 protein_coding
ENST00000452771 (DKC1-012) 154764925-154769210 nonsense_mediated_decay
ENST00000473552 (DKC1-009) 154762913-154766555 processed_transcript
ENST00000475423 (DKC1-007) 154762852-154765355 retained_intron
ENST00000475966 (DKC1-003) 154768543-154776261 processed_transcript
ENST00000481062 (DKC1-004) 154773144-154775314 retained_intron
ENST00000484317 (DKC1-002) 154768024-154770876 retained_intron
ENST00000492372 (DKC1-006) 154775119-154776911 processed_transcript
ENST00000620277 (DKC1-201) 154762742-154777688 protein_coding
ENSG00000160219 (GAB3)
GRB2-associated binding protein 3 		ENST00000369568 (GAB3-002) 154676169-154751073 protein_coding
ENST00000369575 (GAB3-001) 154675253-154751057 protein_coding
ENST00000424127 (GAB3-006) 154677966-154751077 protein_coding
ENST00000454973 (GAB3-004) 154678978-154680219 protein_coding
ENST00000475685 (GAB3-005) 154678290-154696092 processed_transcript
ENST00000496390 (GAB3-003) 154675249-154751583 processed_transcript
CIL_0003LH_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000032750-ENSMUSG00000031403 CGP 10090 X:74966843-75109777
GeneTranscriptPositionBiotype
ENSMUSG00000031402 (Mpp1)
membrane protein, palmitoylated 		ENSMUST00000033775 (Mpp1-001) 75109733-75131016 protein_coding
ENSMUST00000114091 (Mpp1-003) 75111716-75130949 protein_coding
ENSMUST00000114092 (Mpp1-008) 75110648-75130844 protein_coding
ENSMUST00000127023 (Mpp1-004) 75125830-75130953 nonsense_mediated_decay
ENSMUST00000132501 (Mpp1-009) 75112353-75130854 protein_coding
ENSMUST00000132935 (Mpp1-010) 75113565-75130854 processed_transcript
ENSMUST00000135285 (Mpp1-005) 75115836-75117848 retained_intron
ENSMUST00000153318 (Mpp1-007) 75116062-75130854 protein_coding
ENSMUST00000155742 (Mpp1-006) 75121472-75130854 protein_coding
ENSMUST00000156975 (Mpp1-002) 75123007-75130986 retained_intron
ENSMUSG00000031403 (Dkc1)
dyskeratosis congenita 1, dyskerin 		ENSMUST00000033776 (Dkc1-001) 75095854-75109777 protein_coding
ENSMUST00000131155 (Dkc1-011) 75096053-75102550 protein_coding
ENSMUST00000131867 (Dkc1-004) 75096101-75098947 processed_transcript
ENSMUST00000132000 (Dkc1-002) 75096086-75098887 protein_coding
ENSMUST00000135389 (Dkc1-003) 75096099-75098797 retained_intron
ENSMUST00000137286 (Dkc1-010) 75105949-75108276 retained_intron
ENSMUST00000140609 (Dkc1-006) 75096115-75102472 nonsense_mediated_decay
ENSMUST00000145222 (Dkc1-005) 75096546-75098819 retained_intron
ENSMUST00000151327 (Dkc1-007) 75099918-75107211 retained_intron
ENSMUST00000153844 (Dkc1-012) 75100053-75108243 nonsense_mediated_decay
ENSMUST00000154422 (Dkc1-009) 75100948-75105766 processed_transcript
ENSMUST00000154936 (Dkc1-008) 75100259-75105718 processed_transcript
ENSMUSG00000032750 (Gab3)
growth factor receptor bound protein 2-associated protein 3 		ENSMUST00000037374 (Gab3-001) 74988521-75084905 protein_coding
ENSMUST00000114104 (Gab3-004) 74988704-75084757 protein_coding
ENSMUST00000114109 (Gab3-002) 74966843-75084905 protein_coding
ENSMUST00000127024 (Gab3-003) 74967782-74969125 processed_transcript
ENSMUST00000129495 (Gab3-006) 74988706-75085458 processed_transcript
ENSMUSG00000082873 (Gm15367)
predicted gene 15367 		ENSMUST00000122398 (Gm15367-001) 75010590-75011605 processed_pseudogene
ENSMUSG00000089014 (Gm25520)
predicted gene, 25520 		ENSMUST00000158389 (Gm25520-201) 75101409-75101526 snoRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003LH_0001ENSG00000130826ENST00000369550ENST00000412124ENST00000413910ENST00000426673ENST00000437719ENST00000452771ENST00000473552ENST00000475423ENST00000475966ENST00000481062ENST00000484317ENST00000492372ENST00000620277ENSG00000160219ENST00000369568ENST00000369575ENST00000424127ENST00000454973ENST00000475685ENST00000496390CIL_0003LH_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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003LH_0001ENSG00000130826ENST00000369550ENST00000412124ENST00000426673ENST00000437719ENST00000452771ENST00000473552ENST00000475423ENST00000475966ENST00000492372ENST00000620277ENSG00000160219ENST00000369568ENST00000369575ENST00000424127ENST00000475685ENST00000496390CIL_0003LH_0002ENSMUSG00000031402ENSMUST00000033775ENSMUST00000114091ENSMUST00000114092ENSMUST00000127023ENSMUSG00000031403ENSMUST00000033776ENSMUST00000131155ENSMUST00000154422ENSMUSG00000032750ENSMUST00000037374ENSMUST00000114104ENSMUST00000114109ENSMUST00000127024ENSMUST00000129495ENSMUSG00000082873ENSMUST00000122398ENSMUSG00000089014ENSMUST00000158389
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000130826 ENST00000369550 10.917±0.00 20.100±0.00 N/A 7.631±0.00 5.274±3.32 5.393±3.74 3.235±2.51 7.057±6.01 4.713±2.77 6.336±0.00 8.318±0.00 17.820±8.65 13.558±2.66 18.185±2.69
ENST00000412124 N/A N/A 3.213±0.00 2.036±0.00 5.659±0.00 5.214±0.00 0.800±0.00 3.114±0.00 N/A 2.051±0.00 N/A 8.015±0.00 N/A N/A
ENST00000413910 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000426673 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.462±0.00 N/A N/A N/A
ENST00000437719 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.597±0.00 9.600±0.00 N/A N/A
ENST00000452771 N/A N/A N/A N/A N/A N/A N/A 2.039±0.00 N/A N/A N/A N/A N/A N/A
ENST00000473552 N/A N/A 1.829±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000475423 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.757±0.00 N/A N/A N/A N/A
ENST00000475966 N/A N/A N/A N/A N/A N/A N/A N/A 2.014±0.00 N/A N/A N/A N/A N/A
ENST00000481062 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484317 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000492372 N/A N/A 2.007±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 24.820±0.00 13.478±0.00 14.768±0.00
ENST00000620277 N/A N/A N/A N/A 0.568±0.00 1.347±0.00 N/A N/A N/A N/A N/A 4.636±2.61 N/A N/A
ENSG00000160219 ENST00000369568 N/A N/A 0.196±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000369575 1.332±0.00 0.862±0.00 N/A 0.087±0.01 0.681±0.00 N/A 1.011±0.00 0.418±0.00 0.142±0.00 N/A 0.083±0.00 0.331±0.17 1.106±0.00 1.574±0.94
ENST00000424127 N/A N/A N/A N/A 1.137±0.00 1.023±0.00 N/A N/A 0.070±0.00 N/A 0.186±0.00 0.227±0.00 N/A N/A
ENST00000454973 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000475685 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.198±0.00 N/A N/A N/A
ENST00000496390 N/A 2.798±0.00 N/A 0.354±0.00 N/A 0.198±0.00 N/A N/A N/A 0.967±0.00 0.156±0.00 0.231±0.09 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031402 ENSMUST00000033775 12.773±3.73 7.967±2.25 8.107±2.39 4.074±1.19 15.033±3.01 5.537±3.11 1.810±0.35 14.176±1.49 19.349±16.73 8.374±2.49 3.693±0.18 7.969±3.35 16.232±4.68 0.410±0.15
ENSMUST00000114091 N/A N/A 11.391±0.00 N/A 10.294±1.00 4.976±0.00 N/A N/A 23.736±0.00 N/A N/A 8.882±4.11 15.127±4.54 0.529±0.17
ENSMUST00000114092 N/A N/A N/A 9.152±0.00 11.431±0.00 N/A N/A N/A 2.732±0.00 5.327±0.00 N/A 8.091±1.91 11.246±2.96 N/A
ENSMUST00000127023 N/A 42.656±10.99 N/A N/A N/A 27.752±3.97 N/A N/A 14.076±2.24 N/A N/A 22.403±1.48 N/A N/A
ENSMUST00000132501 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132935 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000135285 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153318 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155742 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156975 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000031403 ENSMUST00000033776 5.696±0.62 4.261±0.42 6.187±0.29 6.851±2.35 6.615±1.56 2.510±0.00 2.761±0.14 N/A 10.232±6.70 4.191±0.48 5.679±0.83 5.975±2.54 5.805±0.43 0.656±0.11
ENSMUST00000131155 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 15.113±0.00 N/A N/A
ENSMUST00000131867 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132000 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000135389 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137286 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140609 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000145222 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151327 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153844 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154422 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.616±0.00
ENSMUST00000154936 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000032750 ENSMUST00000037374 0.404±0.25 0.289±0.11 0.431±0.22 0.133±0.03 1.301±0.34 0.375±0.18 0.091±0.01 0.122±0.03 0.575±0.07 0.748±0.52 0.120±0.06 0.667±0.35 0.139±0.01 0.132±0.16
ENSMUST00000114104 0.606±0.06 0.531±0.33 0.163±0.00 0.108±0.04 1.258±0.33 N/A 0.369±0.21 0.240±0.10 0.143±0.11 1.097±0.26 0.119±0.03 0.537±0.24 0.200±0.00 0.267±0.13
ENSMUST00000114109 N/A N/A N/A N/A N/A 0.079±0.00 N/A N/A 0.035±0.00 N/A 0.052±0.00 0.165±0.04 N/A 0.081±0.00
ENSMUST00000127024 N/A 0.279±0.07 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.256±0.08 N/A 0.426±0.15
ENSMUST00000129495 N/A N/A N/A N/A N/A N/A N/A N/A 0.038±0.00 N/A 0.095±0.07 0.326±0.00 0.120±0.12 N/A
ENSMUSG00000082873 ENSMUST00000122398 0.093±0.05 0.409±0.00 0.039±0.00 0.100±0.03 0.425±0.00 0.236±0.08 0.141±0.00 N/A 0.045±0.02 0.299±0.00 N/A 0.362±0.36 N/A 0.079±0.00
ENSMUSG00000089014 ENSMUST00000158389 N/A N/A N/A 41.746±0.00 N/A N/A N/A N/A N/A N/A N/A 28.264±0.00 N/A 31.047±0.00

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