C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000473923 RP11-54C4.1-001 ENSG00000213433 9606 - 5:151765897-151766239 transcribed_processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainKidneyLiverMuscleOvaryPlacentaTestisENST00000473923
Transcript ID Adrenal Brain Kidney Liver Muscle Ovary Placenta Testis
ENST00000473923 0.553±0.00 0.435±0.00 0.401±0.00 0.241±0.05 1.961±0.00 1.265±0.45 0.429±0.03 3.989±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007IC CIL_0007IC_0002 CGP 5:151661096-151772532

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000172206 Gm17511-201 protein_coding Mus_musculus 0 348
ENSMUST00000180255 Gm11942-001 processed_pseudogene Mus_musculus 0 342
ENSMUST00000008036 Rplp1-201 protein_coding Mus_musculus 0 342
ENSMUST00000073722 Gm10073-201 protein_coding Mus_musculus 0 331
ENSMUST00000117047 Gm12165-001 processed_pseudogene Mus_musculus 0 250

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