C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 4, sodium borate transporter, member 11
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000474451 SLC4A11-006 ENSG00000088836 9606 - 20:3227498-3239190 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartKidneyLiverLungMusclePlacentaENST00000474451
Transcript ID Heart Kidney Liver Lung Muscle Placenta
ENST00000474451 0.124±0.00 2.563±0.00 0.014±0.00 1.297±0.00 0.737±0.00 0.015±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000065 CIL_000065_0001 CGP 20:3208868-3239190
CIL_000340 CIL_000340_0001 CGP 20:3227417-3407625

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005215 IEA transporter activity
GO:0005452 IEA inorganic anion exchanger activity
GO:0006810 IEA transport
GO:0006820 IEA anion transport
GO:0008509 IEA anion transmembrane transporter activity
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000099362 Slc4a11-001 protein_coding Mus_musculus 0 1323
ENSMUST00000134647 Slc4a11-002 retained_intron Mus_musculus 0 937
ENSMUST00000144945 Slc4a11-003 retained_intron Mus_musculus 0 730
ENSMUST00000138028 Slc4a11-004 retained_intron Mus_musculus 0 444

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