C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000065_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000125877-ENSG00000088836 CGP 9606 20:3208868-3239190
GeneTranscriptPositionBiotype
ENSG00000088836 (SLC4A11)
solute carrier family 4, sodium borate transporter, member 11 		ENST00000380056 (SLC4A11-002) 3227417-3237727 protein_coding
ENST00000380059 (SLC4A11-001) 3227417-3238166 protein_coding
ENST00000437836 (SLC4A11-007) 3234235-3238713 protein_coding
ENST00000470631 (SLC4A11-004) 3229671-3230560 processed_transcript
ENST00000474451 (SLC4A11-006) 3227498-3239190 nonsense_mediated_decay
ENST00000488544 (SLC4A11-005) 3228928-3229776 processed_transcript
ENST00000539553 (SLC4A11-003) 3227636-3239190 protein_coding
ENSG00000125877 (ITPA)
inosine triphosphatase (nucleoside triphosphate pyrophosphatase) 		ENST00000380113 (ITPA-002) 3209360-3223870 protein_coding
ENST00000399838 (ITPA-007) 3209525-3223870 protein_coding
ENST00000455664 (ITPA-009) 3209513-3223618 protein_coding
ENST00000460550 (ITPA-006) 3209513-3223870 processed_transcript
ENST00000460676 (ITPA-005) 3208898-3218596 processed_transcript
ENST00000461029 (ITPA-008) 3215212-3223449 processed_transcript
ENST00000472295 (ITPA-001) 3221753-3223870 processed_transcript
ENST00000483354 (ITPA-004) 3208868-3223870 processed_transcript
ENST00000490838 (ITPA-003) 3209489-3223870 processed_transcript
ENST00000609835 (ITPA-010) 3209501-3219091 retained_intron
CIL_000065_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000074797-ENSMUSG00000074796 CGP 10090 2:130667610-130697519
GeneTranscriptPositionBiotype
ENSMUSG00000074796 (Slc4a11)
solute carrier family 4, sodium bicarbonate transporter-like, member 11 		ENSMUST00000099362 (Slc4a11-001) 130684113-130697519 protein_coding
ENSMUST00000127397 (Slc4a11-005) 130691549-130697469 protein_coding
ENSMUST00000134647 (Slc4a11-002) 130686577-130697469 retained_intron
ENSMUST00000138028 (Slc4a11-004) 130690833-130691982 retained_intron
ENSMUST00000144945 (Slc4a11-003) 130684113-130688565 retained_intron
ENSMUSG00000074797 (Itpa)
inosine triphosphatase (nucleoside triphosphate pyrophosphatase) 		ENSMUST00000103193 (Itpa-001) 130667610-130681614 protein_coding
ENSMUST00000126714 (Itpa-002) 130667865-130681032 processed_transcript
ENSMUST00000133328 (Itpa-004) 130667808-130675722 processed_transcript
ENSMUST00000138963 (Itpa-003) 130667826-130672103 retained_intron
ENSMUST00000156382 (Itpa-005) 130667805-130676015 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000065_0001ENSG00000088836ENST00000380056ENST00000380059ENST00000437836ENST00000470631ENST00000474451ENST00000488544ENST00000539553ENSG00000125877ENST00000380113ENST00000399838ENST00000455664ENST00000460550ENST00000460676ENST00000461029ENST00000472295ENST00000483354ENST00000490838ENST00000609835CIL_000065_0002ENSMUSG00000074796ENSMUST00000099362ENSMUST00000127397ENSMUST00000134647ENSMUST00000138028ENSMUST00000144945ENSMUSG00000074797ENSMUST00000103193ENSMUST00000126714ENSMUST00000133328ENSMUST00000138963ENSMUST00000156382
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000065_0001ENSG00000088836ENST00000380056ENST00000380059ENST00000474451ENST00000539553ENSG00000125877ENST00000380113ENST00000399838ENST00000455664ENST00000460550ENST00000461029ENST00000472295ENST00000609835CIL_000065_0002ENSMUSG00000074796ENSMUST00000099362ENSMUST00000134647ENSMUST00000138028ENSMUST00000144945ENSMUSG00000074797ENSMUST00000103193ENSMUST00000126714ENSMUST00000138963
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000088836 ENST00000380056 N/A N/A N/A N/A N/A N/A N/A 0.763±0.00 N/A 0.472±0.00 N/A 0.981±0.31 0.122±0.00 0.536±0.00
ENST00000380059 N/A N/A N/A 0.331±0.17 N/A N/A N/A 1.276±0.00 N/A N/A N/A N/A N/A 0.952±0.14
ENST00000437836 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000470631 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000474451 N/A N/A N/A N/A N/A N/A 0.124±0.00 2.563±0.00 0.014±0.00 1.297±0.00 0.737±0.00 N/A 0.015±0.00 N/A
ENST00000488544 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000539553 N/A N/A N/A 0.463±0.00 N/A 0.040±0.00 N/A 2.404±0.00 0.013±0.00 0.228±0.00 0.982±0.00 0.548±0.30 0.125±0.04 1.230±0.34
ENSG00000125877 ENST00000380113 7.907±0.00 6.658±0.00 N/A 4.504±0.40 5.073±1.96 5.357±2.76 3.178±2.43 10.257±6.90 5.862±4.45 4.212±2.29 0.751±0.00 22.248±11.07 24.182±5.23 6.753±1.20
ENST00000399838 N/A N/A N/A 3.378±0.00 N/A N/A N/A N/A N/A 2.776±0.00 2.332±0.00 N/A N/A 5.123±0.00
ENST00000455664 8.492±0.00 15.797±0.00 N/A 6.002±0.00 11.045±0.00 5.234±0.00 4.178±0.00 16.240±0.00 7.514±0.00 4.893±0.00 3.637±0.00 N/A 10.789±0.86 6.634±0.00
ENST00000460550 3.482±0.00 13.521±0.00 N/A 2.032±0.00 7.152±5.36 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000460676 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000461029 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 17.291±12.00 12.447±0.00 N/A
ENST00000472295 N/A N/A N/A N/A 2.335±0.00 N/A N/A N/A N/A N/A 1.560±0.48 21.040±0.00 N/A N/A
ENST00000483354 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000490838 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000609835 N/A N/A 0.869±0.00 N/A 1.763±0.00 N/A N/A N/A 0.592±0.00 N/A N/A 9.853±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000074796 ENSMUST00000099362 1.751±0.85 1.762±0.39 0.211±0.02 0.413±0.04 1.090±0.47 0.379±0.20 0.065±0.02 11.923±1.15 0.109±0.05 0.320±0.11 0.049±0.00 3.202±1.09 1.707±1.22 0.326±0.17
ENSMUST00000127397 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134647 N/A N/A N/A 0.072±0.00 0.230±0.00 0.098±0.01 N/A N/A 0.034±0.00 0.115±0.00 0.026±0.01 0.740±0.41 N/A 0.025±0.00
ENSMUST00000138028 N/A N/A N/A 1.087±0.00 N/A N/A N/A N/A N/A N/A 0.073±0.00 N/A N/A N/A
ENSMUST00000144945 0.594±0.00 N/A 0.071±0.02 0.279±0.00 0.356±0.14 0.096±0.01 0.078±0.00 2.236±0.00 0.035±0.00 0.138±0.00 0.045±0.02 0.588±0.00 0.456±0.37 N/A
ENSMUSG00000074797 ENSMUST00000103193 17.119±0.93 13.928±0.49 18.494±4.38 34.500±11.39 10.319±1.87 13.199±1.22 11.157±0.86 17.435±1.02 20.767±11.52 9.806±1.01 12.893±1.00 20.636±3.72 30.032±9.57 11.418±3.29
ENSMUST00000126714 N/A 14.853±2.07 N/A N/A 6.915±1.16 8.830±1.45 N/A N/A 6.113±0.33 N/A N/A 10.383±0.42 N/A N/A
ENSMUST00000133328 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138963 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 25.444±3.87 7.233±0.00
ENSMUST00000156382 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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