C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: aprataxin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000474658 APTX-028 ENSG00000137074 9606 - 9:32973242-33001579 nonsense_mediated_decay

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000655 CIL_000655_0001 CGP 9:32783499-33025168
CIL_00061D CIL_00061D_0001 CGP 9:32972606-33039907

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000108103 Aptx-003 protein_coding Mus_musculus 0 701
ENSMUST00000068125 Aptx-004 protein_coding Mus_musculus 0 699
ENSMUST00000129021 Aptx-002 nonsense_mediated_decay Mus_musculus 0 699
ENSMUST00000030119 Aptx-001 protein_coding Mus_musculus 0 699
ENSMUST00000128810 Aptx-006 processed_transcript Mus_musculus 0 344

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