C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: aprataxin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000128810 Aptx-006 ENSMUSG00000028411 10090 - 4:40691003-40694507 processed_transcript

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000655 CIL_000655_0002 CGP 4:40472180-40703194
CIL_00061D CIL_00061D_0002 CGP 4:40682382-40737149

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000309615 APTX-201 protein_coding Homo_sapiens 0 344
ENST00000379812 APTX-030 protein_coding Homo_sapiens 0 342
ENST00000379817 APTX-011 protein_coding Homo_sapiens 0 344
ENST00000379819 APTX-003 protein_coding Homo_sapiens 0 344
ENST00000379825 APTX-002 protein_coding Homo_sapiens 0 344
ENST00000397172 APTX-021 protein_coding Homo_sapiens 0 342
ENST00000436040 APTX-203 protein_coding Homo_sapiens 0 344
ENST00000460940 APTX-016 nonsense_mediated_decay Homo_sapiens 7e-17 94
ENST00000463596 APTX-007 protein_coding Homo_sapiens 0 344
ENST00000464632 APTX-018 nonsense_mediated_decay Homo_sapiens 0 344
ENST00000465003 APTX-001 nonsense_mediated_decay Homo_sapiens 0 344
ENST00000467331 APTX-012 nonsense_mediated_decay Homo_sapiens 0 344
ENST00000468275 APTX-017 protein_coding Homo_sapiens 0 344
ENST00000472896 APTX-013 nonsense_mediated_decay Homo_sapiens 7e-17 94
ENST00000473221 APTX-025 protein_coding Homo_sapiens 0 344
ENST00000474658 APTX-028 nonsense_mediated_decay Homo_sapiens 0 344
ENST00000476858 APTX-006 protein_coding Homo_sapiens 0 344
ENST00000477119 APTX-026 protein_coding Homo_sapiens 0 213
ENST00000478279 APTX-019 nonsense_mediated_decay Homo_sapiens 0 344
ENST00000479656 APTX-004 nonsense_mediated_decay Homo_sapiens 0 344
ENST00000480031 APTX-027 nonsense_mediated_decay Homo_sapiens 0 281
ENST00000482687 APTX-015 nonsense_mediated_decay Homo_sapiens 7e-17 94
ENST00000483148 APTX-014 nonsense_mediated_decay Homo_sapiens 7e-17 94
ENST00000485479 APTX-010 nonsense_mediated_decay Homo_sapiens 0 344
ENST00000486724 APTX-032 processed_transcript Homo_sapiens 0 344
ENST00000494649 APTX-009 nonsense_mediated_decay Homo_sapiens 0 344
ENST00000495360 APTX-008 nonsense_mediated_decay Homo_sapiens 0 344
ENST00000496030 APTX-031 retained_intron Homo_sapiens 0.0000000001 71

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