C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger protein 525
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000475179 ZNF525-003 ENSG00000203326 9606 + 19:53365713-53386581 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000475179
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000475179 1.507±0.00 0.253±0.00 0.173±0.00 0.471±0.00 0.749±0.00 0.185±0.00 0.932±0.00 0.176±0.00 0.459±0.00 1.079±0.33 0.910±0.59 1.435±0.30

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004HA CIL_0004HA_0001 CGP 19:53330675-53392217

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0005622 IEA intracellular
GO:0006355 IEA regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000121292 Rpl39l-002 protein_coding Mus_musculus 1.4013e-45 189
ENSMUST00000044103 Rpl39l-001 protein_coding Mus_musculus 1.4013e-45 189
ENSMUST00000115231 Rpl39-001 protein_coding Mus_musculus 9.94922e-44 182
ENSMUST00000142604 Rpl39-ps-002 processed_transcript Mus_musculus 6.99949e-42 176
ENSMUST00000117602 Gm15148-001 processed_pseudogene Mus_musculus 2e-36 158
ENSMUST00000146505 Rpl39-ps-001 transcribed_processed_pseudogene Mus_musculus 2e-32 145
ENSMUST00000121971 Gm12013-001 processed_pseudogene Mus_musculus 7e-32 143
ENSMUST00000191066 RP23-127L14.1-001 processed_pseudogene Mus_musculus 1e-29 135
ENSMUST00000138799 Rpl39-002 retained_intron Mus_musculus 2e-28 132
ENSMUST00000118985 Gm14541-001 processed_pseudogene Mus_musculus 2e-27 128
ENSMUST00000118637 Gm11694-001 processed_pseudogene Mus_musculus 3e-26 124
ENSMUST00000119534 Gm15067-001 processed_pseudogene Mus_musculus 9e-26 122
ENSMUST00000034431 Tmem170-201 protein_coding Mus_musculus 0.00000006 64
ENSMUST00000173269 Neu1-002 retained_intron Mus_musculus 0.0000007 60

Loading