C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: solute carrier family 22 (organic cation/carnitine transporter), member 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000475308 SLC22A5-003 ENSG00000197375 9606 + 5:132388960-132395613 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastLungTestisENST00000475308
Transcript ID Adrenal Breast Lung Testis
ENST00000475308 1.021±0.00 0.614±0.00 1.275±0.00 0.908±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00093D CIL_00093D_0001 VISTA 5:131965137-132566411
CIL_0007RF CIL_0007RF_0001 VISTA 5:131967147-132570227
CIL_0000HR CIL_0000HR_0002 CGP 5:132294443-132395614

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000019044 Slc22a5-001 protein_coding Mus_musculus 0 702
ENSMUST00000076493 Slc22a21-001 protein_coding Mus_musculus 0 508
ENSMUST00000152084 Slc22a5-003 nonsense_mediated_decay Mus_musculus 0 466

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