C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: LIM homeobox 9
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000475727 LHX9-006 ENSG00000143355 9606 + 1:197912488-197917959 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalENST00000475727
Transcript ID Adrenal
ENST00000475727 0.206±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007N3 CIL_0007N3_0001 UCNEbase 1:197596839-198391876

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003714 ISS transcription corepressor activity
GO:0005634 IEA nucleus
GO:0008045 ISS motor neuron axon guidance
GO:0008270 IEA zinc ion binding
GO:0043565 IEA sequence-specific DNA binding
GO:0045892 ISS negative regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000093486 Lhx9-201 protein_coding Mus_musculus 1e-31 139
ENSMUST00000112026 Lhx9-005 protein_coding Mus_musculus 1e-31 139
ENSMUST00000046870 Lhx9-001 protein_coding Mus_musculus 1e-31 139
ENSMUST00000112030 Lhx9-004 protein_coding Mus_musculus 1e-31 139
ENSMUST00000019374 Lhx9-002 protein_coding Mus_musculus 1e-31 139

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