C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000476363 RP11-25H11.1-001 ENSG00000243122 9606 + 15:37490691-37491103 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; MuscleTestisENST00000476363
Transcript ID Muscle Testis
ENST00000476363 0.065±0.00 0.339±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007MM CIL_0007MM_0001 UCNEbase 15:35253766-37880700
CIL_0006QR CIL_0006QR_0001 CGP 15:36889204-37967724
CIL_0008SD CIL_0008SD_0001 VISTA 15:36920473-37522356
CIL_0008V9 CIL_0008V9_0001 VISTA 15:36929623-37530750
CIL_00092N CIL_00092N_0001 VISTA 15:37060582-37662259

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000062674 Rps15-002 protein_coding Mus_musculus 0 387
ENSMUST00000068408 Rps15-001 protein_coding Mus_musculus 0 387
ENSMUST00000118102 Gm8692-001 processed_pseudogene Mus_musculus 0 305
ENSMUST00000161478 Gm6921-001 processed_pseudogene Mus_musculus 0 289

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