C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATP-binding cassette, sub-family B (MDR/TAP), member 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000477092 ABCB8-010 ENSG00000197150 9606 + 7:151028467-151037570 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastHeartKidneyOvaryPlacentaENST00000477092
Transcript ID Adipose Brain Breast Heart Kidney Ovary Placenta
ENST00000477092 1.022±0.00 2.669±0.00 0.530±0.00 0.755±0.00 4.182±0.00 5.656±0.00 3.564±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008T1 CIL_0008T1_0001 VISTA 7:150668461-151272977
CIL_0004O6 CIL_0004O6_0001 CGP 7:151012209-151047782
CIL_0004O7 CIL_0004O7_0001 CGP 7:151028422-151052756

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005524 IEA ATP binding
GO:0005634 IDA nucleus
GO:0005730 IDA nucleolus
GO:0005739 IDA mitochondrion
GO:0006810 IEA transport
GO:0016021 IEA integral component of membrane
GO:0042626 IEA ATPase activity, coupled to transmembrane movement of substances
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000115074 Abcb8-002 protein_coding Mus_musculus 0 1134
ENSMUST00000073076 Abcb8-201 protein_coding Mus_musculus 0 1133
ENSMUST00000115077 Abcb8-001 protein_coding Mus_musculus 0 1133
ENSMUST00000127816 Abcb8-007 retained_intron Mus_musculus 0 226

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