C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: non-SMC element 4 homolog A (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000477289 NSMCE4A-002 ENSG00000107672 9606 - 10:121957091-121959797 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastColonLungMuscleOvaryENST00000477289
Transcript ID Bladder Breast Colon Lung Muscle Ovary
ENST00000477289 2.527±0.00 4.266±0.00 3.956±0.00 3.830±0.00 0.984±0.00 8.140±2.76

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00095T CIL_00095T_0001 VISTA 10:121499915-122101503
CIL_0001BD CIL_0001BD_0001 CGP 10:121740421-121975217
CIL_00047F CIL_00047F_0002 CGP 10:121957088-122254545

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000162510 Nsmce4a-005 retained_intron Mus_musculus 0 237
ENSMUST00000160289 Nsmce4a-001 protein_coding Mus_musculus 0 196

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