C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: drebrin 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000477391 DBN1-009 ENSG00000113758 9606 - 5:177460432-177473613 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000477391
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000477391 16.163±0.00 7.899±0.00 20.101±11.41 6.516±0.00 10.535±8.07 2.291±0.00 5.870±5.63 12.591±0.00 1.623±0.00 21.084±15.69 8.008±0.00 18.067±5.15

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008A2 CIL_0008A2_0001 VISTA 5:177089375-177692188
CIL_0000XB CIL_0000XB_0002 CGP 5:177446445-177474401
CIL_0002YE CIL_0002YE_0001 CGP 5:177456608-177497606

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0005622 IEA intracellular
GO:0007015 IEA actin filament organization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000135705 Dbn1-003 retained_intron Mus_musculus 0 1240
ENSMUST00000109921 Dbn1-009 protein_coding Mus_musculus 0 1240
ENSMUST00000021950 Dbn1-001 protein_coding Mus_musculus 0 1240
ENSMUST00000109923 Dbn1-002 protein_coding Mus_musculus 0 1240
ENSMUST00000139275 Dbn1-005 protein_coding Mus_musculus 0 726
ENSMUST00000139516 Dbn1-008 retained_intron Mus_musculus 0 364
ENSMUST00000175813 Dbn1-010 retained_intron Mus_musculus 0 237

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