C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: PX domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000477592 PXDC1-002 ENSG00000168994 9606 - 6:3722614-3751532 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENST00000477592
Transcript ID Adrenal Bladder Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000477592 3.742±0.00 0.841±0.00 1.205±0.00 1.662±0.00 1.997±0.16 26.196±0.00 9.334±6.77 2.137±1.82 5.320±2.24 18.366±4.03 2.557±0.27

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003IW CIL_0003IW_0001 CGP 6:3268962-3752026
CIL_0007Y7 CIL_0007Y7_0001 VISTA 6:3643401-4244038
CIL_0003IP CIL_0003IP_0001 CGP 6:3722614-3851317

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000125037 Pxdc1-003 nonsense_mediated_decay Mus_musculus 0 822
ENSMUST00000053459 Pxdc1-002 protein_coding Mus_musculus 0 800
ENSMUST00000021847 Pxdc1-001 nonsense_mediated_decay Mus_musculus 0 571
ENSMUST00000152392 Pxdc1-004 protein_coding Mus_musculus 0 339

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