C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nucleoporin 205kDa
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000477620 NUP205-007 ENSG00000155561 9606 + 7:135619814-135648724 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryTestisENST00000477620
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENST00000477620 2.644±0.00 6.613±0.00 2.442±0.00 3.186±0.00 2.708±0.00 1.323±0.00 5.162±0.00 1.955±0.00 3.513±0.00 1.732±0.00 3.882±0.00 6.587±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002H2 CIL_0002H2_0001 CGP 7:135361795-135648757
CIL_00082N CIL_00082N_0001 VISTA 7:135472160-136074488

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005643 IEA nuclear pore

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000043815 Nup205-201 protein_coding Mus_musculus 0 1507

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