C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: B-cell CLL/lymphoma 11A (zinc finger protein)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000479026 BCL11A-013 ENSG00000119866 9606 - 2:60452154-60460455 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonKidneyLungOvaryPlacentaTestisENST00000479026
Transcript ID Adrenal Breast Colon Kidney Lung Ovary Placenta Testis
ENST00000479026 10.655±0.00 1.317±0.00 4.550±0.00 0.170±0.00 1.834±0.00 2.189±0.00 0.150±0.06 1.332±0.49

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007LM CIL_0007LM_0001 UCNEbase 2:57740887-60568309
CIL_0008BH CIL_0008BH_0001 VISTA 2:59914360-60515380
CIL_000881 CIL_000881_0001 VISTA 2:59970922-60574878
CIL_0008WW CIL_0008WW_0001 VISTA 2:59988962-60590957
CIL_0008GM CIL_0008GM_0001 VISTA 2:60234269-60835938
CIL_0009DA CIL_0009DA_0001 VISTA 2:60267677-60869129
CIL_0008PG CIL_0008PG_0001 VISTA 2:60327921-60929753

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000109516 Bcl11a-005 protein_coding Mus_musculus 0 562
ENSMUST00000118955 Bcl11a-001 protein_coding Mus_musculus 0 562
ENSMUST00000000881 Bcl11a-003 protein_coding Mus_musculus 0 556
ENSMUST00000109514 Bcl11a-006 protein_coding Mus_musculus 1e-20 104

Loading