C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SET pseudogene 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000479329 SETP6-001 ENSG00000241319 9606 - 3:81612238-81612805 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENST00000479329
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENST00000479329 0.038±0.00 0.019±0.00 0.082±0.04 0.018±0.00 0.017±0.00 0.242±0.12 0.467±0.00 0.499±0.00 0.218±0.00 2.113±0.00 0.369±0.00 0.032±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00059Y CIL_00059Y_0002 CGP 3:81489699-86074429

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000183511 Gm9531-001 transcribed_processed_pseudogene Mus_musculus 0 588
ENSMUST00000102866 Set-001 protein_coding Mus_musculus 0 588
ENSMUST00000134364 Set-004 protein_coding Mus_musculus 0 588
ENSMUST00000067996 Set-002 protein_coding Mus_musculus 0 580
ENSMUST00000125824 Set-005 processed_transcript Mus_musculus 0 580
ENSMUST00000118921 Gm11877-001 processed_pseudogene Mus_musculus 0 501
ENSMUST00000137291 Set-006 processed_transcript Mus_musculus 0 492
ENSMUST00000121098 Gm12642-001 processed_pseudogene Mus_musculus 0 488
ENSMUST00000149578 Set-003 protein_coding Mus_musculus 0 409

Loading