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C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | SP140 nuclear body protein | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000479539  |
SP140-005 |
ENSG00000079263 |
9606 | + |
2:230310141-230311523  |
retained_intron |
|
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Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0004AU | CIL_0004AU_0003 | CGP | 2:230167293-230313215 |
| CIL_0004AU | CIL_0004AU_0002 | CGP | 2:230203110-230403732 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000189121
|
RP23-6O16.1-001 | unprocessed_pseudogene | Mus_musculus | 7e-32 | 141 |
|
ENSMUST00000162896
|
Gm6264-001 | transcribed_unprocessed_pseudogene | Mus_musculus | 7e-32 | 141 |
|
ENSMUST00000080204
|
Sp140-001 | protein_coding | Mus_musculus | 7e-32 | 141 |
|
ENSMUST00000186987
|
RP23-76P9.2-001 | unprocessed_pseudogene | Mus_musculus | 3e-30 | 135 |
|
ENSMUST00000072767
|
Arhgef12-201 | protein_coding | Mus_musculus | 3e-30 | 135 |
|
ENSMUST00000165665
|
Arhgef12-202 | protein_coding | Mus_musculus | 3e-30 | 135 |
|
ENSMUST00000160010
|
Gm7281-001 | unprocessed_pseudogene | Mus_musculus | 4e-29 | 132 |
