C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene, 18342
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000186987 RP23-76P9.2-001 ENSMUSG00000101279 10090 - 1:85067394-85080236 unprocessed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastKidneyLiverOvaryPlacentaTestisENSMUST00000186987
Transcript ID Adipose Adrenal Bladder Breast Kidney Liver Ovary Placenta Testis
ENSMUST00000186987 0.098±0.03 0.239±0.02 0.208±0.06 0.166±0.00 0.064±0.00 0.075±0.02 0.039±0.00 0.022±0.00 0.072±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004AU CIL_0004AU_0006 CGP 1:84992690-85270566

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000243810 SP140L-201 protein_coding Homo_sapiens 0 261
ENST00000343805 SP140-009 protein_coding Homo_sapiens 0 255
ENST00000392045 SP140-002 protein_coding Homo_sapiens 0 255
ENST00000396563 SP140L-202 protein_coding Homo_sapiens 0 248
ENST00000415673 SP140L-009 protein_coding Homo_sapiens 0 261
ENST00000417495 SP140-004 protein_coding Homo_sapiens 0 255
ENST00000420434 SP140-201 protein_coding Homo_sapiens 0 255
ENST00000479539 SP140-005 retained_intron Homo_sapiens 3e-30 135
ENST00000483728 SP140L-002 retained_intron Homo_sapiens 4e-26 124
ENST00000497212 SP140L-007 retained_intron Homo_sapiens 2e-18 97

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