C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 6264
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000162896 Gm6264-001 ENSMUSG00000089716 10090 + 1:85160863-85194260 transcribed_unprocessed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastHeartKidneyLiverENSMUST00000162896
Transcript ID Adipose Bladder Brain Breast Heart Kidney Liver
ENSMUST00000162896 0.038±0.00 1.781±0.00 0.812±0.06 0.078±0.00 0.028±0.00 0.090±0.00 0.251±0.24

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004AU CIL_0004AU_0006 CGP 1:84992690-85270566

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000243810 SP140L-201 protein_coding Homo_sapiens 0 263
ENST00000343805 SP140-009 protein_coding Homo_sapiens 0 270
ENST00000392045 SP140-002 protein_coding Homo_sapiens 0 270
ENST00000396563 SP140L-202 protein_coding Homo_sapiens 0 263
ENST00000415673 SP140L-009 protein_coding Homo_sapiens 0 263
ENST00000417495 SP140-004 protein_coding Homo_sapiens 0 270
ENST00000420434 SP140-201 protein_coding Homo_sapiens 0 270
ENST00000479539 SP140-005 retained_intron Homo_sapiens 7e-32 141
ENST00000483728 SP140L-002 retained_intron Homo_sapiens 0 219
ENST00000497212 SP140L-007 retained_intron Homo_sapiens 5e-30 135

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