C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein tyrosine phosphatase, receptor type, E
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000479896 PTPRE-005 ENSG00000132334 9606 + 10:128047631-128085855 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastLungOvaryTestisENST00000479896
Transcript ID Adipose Adrenal Brain Breast Lung Ovary Testis
ENST00000479896 1.321±0.00 1.208±0.00 1.263±0.00 0.551±0.00 1.809±0.00 0.396±0.16 0.185±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00083E CIL_00083E_0001 VISTA 10:127865799-128466830
CIL_0001LJ CIL_0001LJ_0001 CGP 10:127877841-128085855
CIL_00028S CIL_00028S_0001 CGP 10:127907061-128126385

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004725 IEA protein tyrosine phosphatase activity
GO:0006470 IEA protein dephosphorylation
GO:0016311 IEA dephosphorylation
GO:0016791 IEA phosphatase activity
GO:0035335 IEA peptidyl-tyrosine dephosphorylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000073961 Ptpre-201 protein_coding Mus_musculus 0 1354
ENSDART00000111090 ptprh-201 protein_coding Danio_rerio 0.0000002 64
ENSDART00000131392 ptprh-001 protein_coding Danio_rerio 0.0000002 64

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