C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: U2 snRNP-associated SURP domain containing
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000480029 U2SURP-005 ENSG00000163714 9606 + 3:143025782-143053782 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartOvaryTestisENST00000480029
Transcript ID Heart Ovary Testis
ENST00000480029 1.530±0.00 5.464±0.00 12.452±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003723 IEA RNA binding
GO:0006396 IEA RNA processing

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000191213 U2surp-009 nonsense_mediated_decay Mus_musculus 0 2126
ENSMUST00000078374 U2surp-001 protein_coding Mus_musculus 0 2126
ENSMUST00000079659 U2surp-002 protein_coding Mus_musculus 0 2126
ENSMUST00000186139 U2surp-007 retained_intron Mus_musculus 0 364

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