C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: U2 snRNP-associated SURP domain containing
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000186139 U2surp-007 ENSMUSG00000032407 10090 - 9:95478028-95482244 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonOvaryENSMUST00000186139
Transcript ID Adrenal Breast Colon Ovary
ENSMUST00000186139 0.487±0.00 0.369±0.00 0.710±0.00 1.059±0.34

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000463563 U2SURP-004 nonsense_mediated_decay Homo_sapiens 0 364
ENST00000472373 U2SURP-014 retained_intron Homo_sapiens 0 364
ENST00000473835 U2SURP-001 protein_coding Homo_sapiens 0 364
ENST00000480029 U2SURP-005 protein_coding Homo_sapiens 0 364
ENST00000488497 U2SURP-002 nonsense_mediated_decay Homo_sapiens 0 364
ENST00000493598 U2SURP-022 protein_coding Homo_sapiens 0 364
ENST00000496100 U2SURP-017 retained_intron Homo_sapiens 3e-40 169

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