C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: SOGA family member 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000481848 SOGA3-001 ENSG00000255330 9606 - 6:127438406-127519001 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonLungOvaryENST00000481848
Transcript ID Brain Colon Lung Ovary
ENST00000481848 1.982±0.87 0.398±0.00 0.481±0.00 0.057±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001EL CIL_0001EL_0002 CGP 6:127438406-127519355

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005615 IEA extracellular space
GO:0010506 IEA regulation of autophagy
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000092629 Soga3-201 protein_coding Mus_musculus 0 3624
ENSMUST00000092627 9330159F19Rik-201 protein_coding Mus_musculus 0 880

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