C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATP-binding cassette, sub-family B (MDR/TAP), member 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000482899 ABCB8-011 ENSG00000197150 9606 + 7:151037688-151045562 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBreastKidneyOvaryENST00000482899
Transcript ID Adrenal Bladder Breast Kidney Ovary
ENST00000482899 0.945±0.00 0.404±0.00 0.521±0.00 0.202±0.00 1.307±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008T1 CIL_0008T1_0001 VISTA 7:150668461-151272977
CIL_0004O6 CIL_0004O6_0001 CGP 7:151012209-151047782
CIL_0004O7 CIL_0004O7_0001 CGP 7:151028422-151052756

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000073076 Abcb8-201 protein_coding Mus_musculus 0 833
ENSMUST00000115077 Abcb8-001 protein_coding Mus_musculus 0 833
ENSMUST00000136459 Abcb8-003 retained_intron Mus_musculus 0 536
ENSMUST00000138089 Baz2b-013 processed_transcript Mus_musculus 0.0002 53
ENSMUST00000134908 Baz2b-012 processed_transcript Mus_musculus 0.0002 53
ENSMUST00000151756 Baz2b-011 processed_transcript Mus_musculus 0.0002 53

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