C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: signal transducing adaptor molecule (SH3 domain and ITAM motif) 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000482997 STAM2-004 ENSG00000115145 9606 - 2:152126004-152175729 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastHeartLiverLungMuscleOvaryPlacentaTestisENST00000482997
Transcript ID Brain Breast Heart Liver Lung Muscle Ovary Placenta Testis
ENST00000482997 1.861±0.00 3.152±0.00 1.051±0.00 3.917±0.00 6.509±0.00 0.502±0.00 2.125±0.00 3.093±0.00 22.087±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007E3 CIL_0007E3_0001 CGP 2:151832776-152175992
CIL_0007E6 CIL_0007E6_0001 CGP 2:152116801-152649834

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000102759 Stam2-001 protein_coding Mus_musculus 0 1404
ENSMUST00000127316 Stam2-002 protein_coding Mus_musculus 0 989
ENSMUST00000150582 Stam2-003 retained_intron Mus_musculus 0 948
ENSMUST00000155516 Stam2-005 nonsense_mediated_decay Mus_musculus 0 802
ENSMUST00000138290 Stam2-004 protein_coding Mus_musculus 0 327

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