C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | aprataxin | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000483148  |
APTX-014 |
ENSG00000137074 |
9606 | - |
9:32972618-32990088  |
nonsense_mediated_decay |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_000655 | CIL_000655_0001 | CGP | 9:32783499-33025168 |
| CIL_00061D | CIL_00061D_0001 | CGP | 9:32972606-33039907 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0000738 | IEA | DNA catabolic process, exonucleolytic |
| GO:0003677 | IEA | DNA binding |
| GO:0005515 | IEA | protein binding |
| GO:0006281 | IEA | DNA repair |
| GO:0033699 | IEA | DNA 5'-adenosine monophosphate hydrolase activity |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000068125
|
Aptx-004 | protein_coding | Mus_musculus | 0 | 311 |
|
ENSMUST00000108103
|
Aptx-003 | protein_coding | Mus_musculus | 0 | 311 |
|
ENSMUST00000129021
|
Aptx-002 | nonsense_mediated_decay | Mus_musculus | 0 | 311 |
|
ENSMUST00000030119
|
Aptx-001 | protein_coding | Mus_musculus | 0 | 311 |
|
ENSMUST00000155710
|
Aptx-005 | nonsense_mediated_decay | Mus_musculus | 0 | 231 |
|
ENSMUST00000128810
|
Aptx-006 | processed_transcript | Mus_musculus | 7e-17 | 94 |
