C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: sorting nexin 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000483485 SNX5-005 ENSG00000089006 9606 - 20:17941597-17961995 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastHeartENST00000483485
Transcript ID Breast Heart
ENST00000483485 3.490±0.00 0.991±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008YD CIL_0008YD_0001 VISTA 20:17559199-18160694
CIL_0002MX CIL_0002MX_0001 CGP 20:17693672-17968980

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000028909 Snx5-003 protein_coding Mus_musculus 0 966
ENSMUST00000110030 Snx5-001 protein_coding Mus_musculus 0 966
ENSMUST00000153033 Snx5-004 processed_transcript Mus_musculus 0 429
ENSMUST00000156936 Snx5-005 processed_transcript Mus_musculus 0 239
ENSMUST00000124389 Snx5-008 processed_transcript Mus_musculus 1e-36 159

Loading