C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | sorting nexin 5 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000153033  |
Snx5-004 |
ENSMUSG00000027423 |
10090 | - |
2:144254794-144260762  |
processed_transcript |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008YD | CIL_0008YD_0002 | VISTA | 2:143876906-144478692 |
| CIL_0002MX | CIL_0002MX_0002 | CGP | 2:144033059-144270906 |
| CIL_00020B | CIL_00020B_0002 | CGP | 2:144250123-144281227 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000377759
|
SNX5-019 | protein_coding | Homo_sapiens | 0 | 429 |
|
ENST00000377768
|
SNX5-001 | protein_coding | Homo_sapiens | 0 | 429 |
|
ENST00000419004
|
SNX5-012 | protein_coding | Homo_sapiens | 0 | 429 |
|
ENST00000431277
|
SNX5-013 | protein_coding | Homo_sapiens | 0 | 381 |
|
ENST00000474883
|
SNX5-008 | processed_transcript | Homo_sapiens | 0 | 381 |
|
ENST00000475716
|
SNX5-010 | processed_transcript | Homo_sapiens | 9.99995e-41 | 171 |
|
ENST00000483485
|
SNX5-005 | processed_transcript | Homo_sapiens | 0 | 429 |
|
ENST00000490175
|
SNX5-002 | processed_transcript | Homo_sapiens | 0 | 429 |
|
ENST00000494401
|
SNX5-009 | processed_transcript | Homo_sapiens | 0 | 381 |
|
ENST00000547000
|
RP11-350G24.2-001 | unprocessed_pseudogene | Homo_sapiens | 0 | 342 |
