C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Alstrom syndrome 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000484298 ALMS1-002 ENSG00000116127 9606 + 2:73385758-73609715 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000484298
Transcript ID Adipose Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000484298 0.507±0.00 1.498±0.00 0.633±0.38 1.440±1.02 0.230±0.02 0.310±0.00 0.375±0.21 1.220±0.00 0.203±0.00 1.416±0.00 0.122±0.02 2.470±0.43

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003EB CIL_0003EB_0001 CGP 2:73290929-73610793
CIL_0000LA CIL_0000LA_0001 CGP 2:73385758-73642393

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000072018 Alms1-001 protein_coding Mus_musculus 0 2350

Loading