C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: spermine oxidase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000484515 SMOX-009 ENSG00000088826 9606 + 20:4148831-4181976 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastKidneyLiverENST00000484515
Transcript ID Breast Kidney Liver
ENST00000484515 0.213±0.00 1.244±0.00 0.280±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00068E CIL_00068E_0002 CGP 20:3927309-4187747
CIL_00037W CIL_00037W_0001 CGP 20:4120980-4249074

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000183575 Smox-013 nonsense_mediated_decay Mus_musculus 0 558
ENSMUST00000110180 Smox-009 protein_coding Mus_musculus 0 555
ENSMUST00000110181 Smox-010 protein_coding Mus_musculus 0 555
ENSMUST00000110188 Smox-011 protein_coding Mus_musculus 0 555
ENSMUST00000110186 Smox-008 protein_coding Mus_musculus 0 555
ENSMUST00000110183 Smox-007 protein_coding Mus_musculus 0 555
ENSMUST00000110189 Smox-005 protein_coding Mus_musculus 0 555
ENSMUST00000151627 Smox-004 retained_intron Mus_musculus 0 555
ENSMUST00000110179 Smox-003 protein_coding Mus_musculus 0 555
ENSMUST00000183947 Smox-002 nonsense_mediated_decay Mus_musculus 0 555
ENSMUST00000028806 Smox-001 protein_coding Mus_musculus 0 555
ENSMUST00000129143 Smox-012 protein_coding Mus_musculus 0 508
ENSMUST00000110182 Smox-006 protein_coding Mus_musculus 0 392
ENSMUST00000149180 Smox-015 processed_transcript Mus_musculus 0 346
ENSMUST00000131698 Smox-014 protein_coding Mus_musculus 0 296
ENSMUST00000183881 Smox-016 nonsense_mediated_decay Mus_musculus 3e-27 126

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