C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Ras and Rab interactor 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000484638 RIN2-001 ENSG00000132669 9606 + 20:19935125-20002457 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLungMuscleOvaryPlacentaTestisENST00000484638
Transcript ID Adipose Brain Breast Colon Heart Kidney Lung Muscle Ovary Placenta Testis
ENST00000484638 10.960±0.00 4.352±2.87 7.558±0.00 3.960±0.00 2.677±0.00 8.572±0.00 11.901±0.00 2.423±0.00 3.805±0.82 3.441±1.74 2.588±2.09

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002MY CIL_0002MY_0001 CGP 20:19212646-20002457
CIL_0007Z5 CIL_0007Z5_0001 VISTA 20:19702996-20303586
CIL_0002MT CIL_0002MT_0001 CGP 20:19886521-20033655

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000094480 Rin2-201 protein_coding Mus_musculus 0 3081
ENSMUST00000110005 Rin2-002 protein_coding Mus_musculus 0 3081
ENSMUST00000147976 Rin2-001 nonsense_mediated_decay Mus_musculus 0 3081
ENSMUST00000145874 Rin2-005 processed_transcript Mus_musculus 0 527
ENSDART00000131128 rin2-202 protein_coding Danio_rerio 0 383
ENSDART00000110494 rin2-201 protein_coding Danio_rerio 0 383
ENSDART00000138043 rin2-001 protein_coding Danio_rerio 0 383
ENSMUST00000149269 Rin2-006 processed_transcript Mus_musculus 0 357
ENSMUST00000144278 Rin2-007 processed_transcript Mus_musculus 4e-27 128

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