C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1, 8kDa
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000484769 NDUFAB1-002 ENSG00000004779 9606 - 16:23581033-23596303 nonsense_mediated_decay

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastENST00000484769
Transcript ID Breast
ENST00000484769 1.926±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006D2 CIL_0006D2_0001 CGP 16:23557362-23596356
CIL_0003VC CIL_0003VC_0002 CGP 16:23581002-23641310

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000123296 Ndufab1-002 protein_coding Mus_musculus 0 409
ENSMUST00000106471 Ndufab1-006 protein_coding Mus_musculus 0 405
ENSMUST00000033157 Ndufab1-001 protein_coding Mus_musculus 0 405
ENSMUST00000139456 Ndufab1-007 protein_coding Mus_musculus 0 403
ENSMUST00000118750 Gm4459-001 processed_pseudogene Mus_musculus 0 383
ENSMUST00000166096 Gm17257-201 processed_pseudogene Mus_musculus 0 383
ENSMUST00000130904 Ndufab1-005 retained_intron Mus_musculus 0 313
ENSMUST00000153173 Ndufab1-004 retained_intron Mus_musculus 0 237
ENSMUST00000130857 Ndufab1-008 retained_intron Mus_musculus 3.00018e-42 176
ENSMUST00000146964 Ndufab1-010 retained_intron Mus_musculus 9.99995e-41 171
ENSMUST00000118534 Gm16032-001 processed_pseudogene Mus_musculus 1e-35 154

Loading