C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: lysosomal-associated membrane protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000486593 LAMP2-003 ENSG00000005893 9606 - X:120431248-120449068 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderMuscleOvaryENST00000486593
Transcript ID Bladder Muscle Ovary
ENST00000486593 13.621±0.00 8.213±0.00 13.975±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00016Y CIL_00016Y_0002 CGP X:120362085-120469365
CIL_00016X CIL_00016X_0002 CGP X:120427827-120575794

Gene Ontology

GO IDEvidence TypeGO Description
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000061755 Lamp2-002 protein_coding Mus_musculus 0 675
ENSMUST00000016678 Lamp2-001 protein_coding Mus_musculus 0 392
ENSMUST00000074913 Lamp2-003 protein_coding Mus_musculus 0 387
ENSMUST00000136817 Lamp2-004 retained_intron Mus_musculus 5e-36 156

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