C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: collagen, type VII, alpha 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000487017 COL7A1-002 ENSG00000114270 9606 - 3:48564073-48584520 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000487017
Transcript ID Adipose Adrenal Brain Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000487017 0.047±0.00 0.213±0.00 0.273±0.00 0.258±0.00 0.176±0.00 1.032±0.00 0.083±0.00 0.570±0.00 0.295±0.00 3.214±1.52 0.944±0.15 2.150±1.51

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000026740 Col7a1-201 protein_coding Mus_musculus 0 3140
ENSMUST00000112070 Col7a1-001 protein_coding Mus_musculus 0 3140
ENSMUST00000126780 Col7a1-002 retained_intron Mus_musculus 0 1701

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