C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein kinase, interferon-inducible double stranded RNA dependent activator
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000487082 PRKRA-003 ENSG00000180228 9606 - 2:178431966-178450764 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000Z1 CIL_0000Z1_0001 CGP 2:178194481-178451512
CIL_0000Z0 CIL_0000Z0_0001 CGP 2:178431414-178461390

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm
GO:0005829 TAS cytosol
GO:0006955 TAS immune response
GO:0008047 TAS enzyme activator activity
GO:0008285 TAS negative regulation of cell proliferation
GO:0009615 TAS response to virus
GO:0010467 TAS gene expression
GO:0016020 IDA membrane
GO:0030422 IDA production of siRNA involved in RNA interference
GO:0042803 IPI protein homodimerization activity
GO:0043085 TAS positive regulation of catalytic activity
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000002808 Prkra-001 protein_coding Mus_musculus 0 1186
ENSMUST00000140493 Prkra-002 processed_transcript Mus_musculus 0 387

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