C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: protein kinase, interferon inducible double stranded RNA dependent activator
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000140493 Prkra-002 ENSMUSG00000002731 10090 - 2:76636795-76640733 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryENSMUST00000140493
Transcript ID Ovary
ENSMUST00000140493 1.899±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000Z1 CIL_0000Z1_0002 CGP 2:76406508-76648015
CIL_0000Z0 CIL_0000Z0_0002 CGP 2:76629898-76658556

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000325748 PRKRA-001 protein_coding Homo_sapiens 0 387
ENST00000424699 PRKRA-002 nonsense_mediated_decay Homo_sapiens 0 385
ENST00000432031 PRKRA-009 protein_coding Homo_sapiens 0 387
ENST00000442762 DASS-23B5.1-001 processed_pseudogene Homo_sapiens 0 375
ENST00000443336 DASS-23B5.1-001 processed_pseudogene Homo_sapiens 0 381
ENST00000448279 PRKRA-011 nonsense_mediated_decay Homo_sapiens 0 222
ENST00000474793 PRKRA-012 retained_intron Homo_sapiens 0 385
ENST00000487082 PRKRA-003 protein_coding Homo_sapiens 0 387
ENST00000490501 PRKRA-004 retained_intron Homo_sapiens 0 289

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